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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2677

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OFD1 HGNC:2567 (HGNC)
8481 (Entrez Gene)
300170 (OMIM)
ChrX p22 ChrX:13715430-13769361 (+)
GRCh38
Joubert Syndrome 10; JBTS10
Orofaciodigital Syndrome I; OFD1
Retinitis Pigmentosa 23; RP23
Simpson-Golabi-Behmel Syndrome, Type 2
O75665 (UniProt | EBI)
NM_003611 (RefSeq)
mouse Ofd1 MGI:1350328 (MGI)
237222 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 77.28 cM ChrX:166390033-166440704 (-)
GRCm38
OTTMUSG00000019549 (VEGA)
OTTMUSP00000021090 (VEGA)
OTTMUST00000046686 (VEGA)
rat Ofd1 302661 (Entrez Gene)
ChrX q21 NP_001100431 (RefSeq)
NM_001106961 (RefSeq)
chimpanzee OFD1 465498 (Entrez Gene)
ChrX XP_003953984 (RefSeq)
rhesus macaque OFD1 711677 (Entrez Gene)
ChrX XP_001098244 (RefSeq)
cattle OFD1 526925 (Entrez Gene)
ChrX NP_001179566 (RefSeq)
NM_001192637 (RefSeq)
dog OFD1 480841 (Entrez Gene)
ChrX XP_537958 (RefSeq)
chicken OFD1 418633 (Entrez Gene)
Chr1 XP_416831 (RefSeq)
western clawed frog ofd1 733523 (Entrez Gene)
ChrUN XP_002933857 (RefSeq)
zebrafish ofd1 327216 (Entrez Gene)
Chr9 Q7SZK7 (UniProt | EBI)
NM_001004496 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory