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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
26700

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SHKBP1 HGNC:19214 (HGNC)
92799 (Entrez Gene)
617322 (OMIM)
HGNC homology
Chr19 q13.2 Chr19:40576851-40591399 (+)
GRCh38.p7
Q8TBC3 (UniProt | EBI)
NM_138392 (RefSeq)
mouse Shkbp1 MGI:2385803 (MGI)
192192 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 15.88 cM Chr7:27342133-27356019 (-)
GRCm38
ENSMUSG00000089832 (Ensembl Gene Model)
ENSMUSP00000003857 (Ensembl)
ENSMUST00000003857 (Ensembl)
rat Shkbp1 292735 (Entrez Gene)
Chr1 q21 P0C5J9 (UniProt | EBI)
NM_001271080 (RefSeq)
chimpanzee SHKBP1 456041 (Entrez Gene)
Chr19 XP_016791503 (RefSeq)
cattle SHKBP1 512402 (Entrez Gene)
Chr18 A3KMV1 (UniProt | EBI)
NM_001082607 (RefSeq)
dog SHKBP1 476455 (Entrez Gene)
Chr1 XP_533665 (RefSeq)
zebrafish shkbp1 562395 (Entrez Gene)
Chr18 XP_001920935 (RefSeq)
frog, western clawed shkbp1 100486587 (Entrez Gene)
Chr8 XP_012824732 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory