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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
26544

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA2D4 HGNC:20202 (HGNC)
93589 (Entrez Gene)
608171 (OMIM)
Chr12 p13.33 Chr12:1791957-1918704 (-)
GRCh38
Retinal Cone Dystrophy 4; RCD4
Q7Z3S7 (UniProt | EBI)
NM_172364 (RefSeq)
mouse Cacna2d4 MGI:2442632 (MGI)
319734 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 56.62 cM Chr6:119236526-119352407 (+)
GRCm38
OTTMUSG00000049377 (VEGA)
OTTMUSP00000068117 (VEGA)
OTTMUST00000125861 (VEGA)
rat Cacna2d4 312668 (Entrez Gene)
Chr4 q42 NP_001178680 (RefSeq)
NM_001191751 (RefSeq)
chimpanzee CACNA2D4 466912 (Entrez Gene)
Chr12 XP_009422881 (RefSeq)
rhesus macaque CACNA2D4 721703 (Entrez Gene)
Chr11 XP_001117901 (RefSeq)
cattle CACNA2D4 784075 (Entrez Gene)
Chr5 XP_001787557 (RefSeq)
dog CACNA2D4 477733 (Entrez Gene)
Chr27 XP_534930 (RefSeq)
chicken CACNA2D4 100858946 (Entrez Gene)
Chr1 XP_003640465 (RefSeq)
western clawed frog cacna2d4 100488361 (Entrez Gene)
ChrUN XP_002938150 (RefSeq)
zebrafish cacna2d4a 568225 (Entrez Gene)
Chr4 XP_009298705 (RefSeq)
cacna2d4b 100150428 (Entrez Gene)
Chr25 XP_009296274 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory