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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
26175

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human WHSC1 HGNC:12766 (HGNC)
7468 (Entrez Gene)
602952 (OMIM)
Chr4 p16.3 Chr4:1871396-1982207 (+)
GRCh38
Wolf-Hirschhorn Syndrome; WHS
O96028 (UniProt | EBI)
NM_007331 (RefSeq)
mouse Whsc1 MGI:1276574 (MGI)
107823 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 17.83 cM Chr5:33820725-33897975 (+)
GRCm38
Wolf-Hirschhorn Syndrome; WHS
OTTMUSG00000025044 (VEGA)
OTTMUSP00000030262 (VEGA)
OTTMUST00000061620 (VEGA)
rat Whsc1 680537 (Entrez Gene)
Chr14 q21 NP_001178481 (RefSeq)
NM_001191552 (RefSeq)
chimpanzee WHSC1 461070 (Entrez Gene)
Chr4 XP_001146084 (RefSeq)
rhesus macaque LOC712618 712618 (Entrez Gene)
Chr1 XP_002802212 (RefSeq)
cattle WHSC1 540769 (Entrez Gene)
Chr6 XP_613048 (RefSeq)
dog WHSC1 479077 (Entrez Gene)
Chr3 XP_536224 (RefSeq)
chicken WHSC1 422897 (Entrez Gene)
Chr4 XP_420839 (RefSeq)
western clawed frog whsc1 100125213 (Entrez Gene)
ChrUN XP_002936809 (RefSeq)
zebrafish whsc1 100000709 (Entrez Gene)
Chr13 NP_001076020 (RefSeq)
NM_001082551 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory