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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
257

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PMM2 HGNC:9115 (HGNC)
5373 (Entrez Gene)
601785 (OMIM)
Chr16 p13 Chr16:8797813-8849337 (+)
GRCh38
Congenital Disorder of Glycosylation, Type IA; CDG1A
O15305 (UniProt | EBI)
NM_000303 (RefSeq)
mouse Pmm2 MGI:1859214 (MGI)
54128 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 4.24 cM Chr16:8637674-8657531 (+)
GRCm38
OTTMUSG00000025198 (VEGA)
OTTMUSP00000030534 (VEGA)
OTTMUST00000062041 (VEGA)
rat Pmm2 302915 (Entrez Gene)
Chr10 q12 NP_001100443 (RefSeq)
NM_001106973 (RefSeq)
chimpanzee PMM2 453905 (Entrez Gene)
Chr16 XP_510805 (RefSeq)
rhesus macaque PMM2 709122 (Entrez Gene)
Chr20 NP_001244362 (RefSeq)
NM_001257433 (RefSeq)
cattle PMM2 510978 (Entrez Gene)
Chr25 Q3SZJ9 (UniProt | EBI)
NM_001035095 (RefSeq)
dog PMM2 490013 (Entrez Gene)
Chr6 XP_547133 (RefSeq)
chicken PMM2 427679 (Entrez Gene)
Chr14 NP_001026639 (RefSeq)
NM_001031468 (RefSeq)
western clawed frog pmm1 100127589 (Entrez Gene)
ChrUN NP_001106421 (RefSeq)
NM_001112950 (RefSeq)
zebrafish pmm2 368229 (Entrez Gene)
Chr1 NP_956378 (RefSeq)
NM_200084 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory