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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
2562

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ZIC1 HGNC:12872 (HGNC)
7545 (Entrez Gene)
600470 (OMIM)
Chr3 q24 Chr3:147409394-147416719 (+)
GRCh38
Q15915 (UniProt | EBI)
NM_003412 (RefSeq)
mouse Zic1 MGI:106683 (MGI)
22771 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 48.26 cM Chr9:91358058-91365810 (-)
GRCm38
Dandy-Walker Syndrome; DWS
OTTMUSG00000020412 (VEGA)
OTTMUSP00000022225 (VEGA)
OTTMUST00000048472 (VEGA)
rat Zic1 64618 (Entrez Gene)
Chr8 q31 NP_073168 (RefSeq)
NM_022677 (RefSeq)
chimpanzee ZIC1 460759 (Entrez Gene)
Chr3 XP_516806 (RefSeq)
rhesus macaque ZIC1 715102 (Entrez Gene)
Chr2 XP_001105173 (RefSeq)
cattle ZIC1 516827 (Entrez Gene)
Chr1 XP_594986 (RefSeq)
chicken ZIC1 374103 (Entrez Gene)
Chr9 Q8JJC0 (UniProt | EBI)
NM_204254 (RefSeq)
zebrafish zic1 30096 (Entrez Gene)
Chr24 NP_571008 (RefSeq)
NM_130933 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/15/2014
MGI 5.17
The Jackson Laboratory