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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PLOD1 HGNC:9081 (HGNC)
5351 (Entrez Gene)
153454 (OMIM)
HGNC homology
Chr1 p36.22 Chr1:11934667-11975542 (+)
Q02809 (UniProt | EBI)
NM_000302 (RefSeq)
mouse Plod1 MGI:99907 (MGI)
18822 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 78.57 cM Chr4:147909753-147936767 (-)
Ehlers-Danlos syndrome
ENSMUSG00000019055 (Ensembl Gene Model)
ENSMUSP00000019199 (Ensembl)
ENSMUST00000019199 (Ensembl)
rat Plod1 116552 (Entrez Gene)
Chr5 q36 Q63321 (UniProt | EBI)
NM_053827 (RefSeq)
chimpanzee PLOD1 457956 (Entrez Gene)
Chr1 XP_016809649 (RefSeq)
cattle PLOD1 281409 (Entrez Gene)
Chr16 O77588 (UniProt | EBI)
NM_174148 (RefSeq)
dog PLOD1 487440 (Entrez Gene)
Chr2 NP_001271371 (RefSeq)
NM_001284442 (RefSeq)
chicken PLOD1 419485 (Entrez Gene)
Chr21 P24802 (UniProt | EBI)
NM_001005618 (RefSeq)
zebrafish plod1a 777635 (Entrez Gene)
Chr8 NP_001071210 (RefSeq)
NM_001077742 (RefSeq)
frog, western clawed plod1 779793 (Entrez Gene)
Chr7 NP_001072340 (RefSeq)
NM_001078872 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory