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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
2541

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VRK1 HGNC:12718 (HGNC)
7443 (Entrez Gene)
602168 (OMIM)
Chr14 q32 Chr14:96797347-96881614 (+)
GRCh38
Pontocerebellar Hypoplasia, Type 1A; PCH1A
Q99986 (UniProt | EBI)
NM_003384 (RefSeq)
mouse Vrk1 MGI:1261847 (MGI)
22367 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 56.37 cM Chr12:106010263-106077410 (+)
GRCm38
22367 (NCBI Gene Model)
Q80X41 (UniProt | EBI)
NM_011705 (RefSeq)
rat Vrk1 362779 (Entrez Gene)
Chr6 q32 NP_001012194 (RefSeq)
NM_001012194 (RefSeq)
chimpanzee VRK1 453148 (Entrez Gene)
Chr14 XP_510157 (RefSeq)
rhesus macaque VRK1 704798 (Entrez Gene)
Chr7 NP_001244605 (RefSeq)
NM_001257676 (RefSeq)
cattle VRK1 618880 (Entrez Gene)
Chr21 Q32PI1 (UniProt | EBI)
NM_001038224 (RefSeq)
dog VRK1 490848 (Entrez Gene)
Chr8 XP_547970 (RefSeq)
chicken VRK1 423443 (Entrez Gene)
Chr5 NP_001006485 (RefSeq)
NM_001006485 (RefSeq)
zebrafish LOC794952 794952 (Entrez Gene)
Chr1 XP_001333525 (RefSeq)
vrk1 406694 (Entrez Gene)
Chr17 Q7ZUS1 (UniProt | EBI)
NM_213385 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory