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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
250

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKD1 HGNC:9008 (HGNC)
5310 (Entrez Gene)
601313 (OMIM)
Chr16 p13.3 Chr16:2088708-2135898 (-)
GRCh38
Polycystic Kidney Disease 1; PKD1
P98161 (UniProt | EBI)
NM_000296 (RefSeq)
mouse Pkd1 MGI:97603 (MGI)
18763 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 12.4 cM Chr17:24549950-24596514 (+)
GRCm38
Polycystic Kidney Disease 1; PKD1
Polycystic Kidney Disease, Autosomal Recessive; ARPKD
18763 (NCBI Gene Model)
O08852 (UniProt | EBI)
NM_013630 (RefSeq)
rat Pkd1 24650 (Entrez Gene)
Chr10 q12 NP_001244281 (RefSeq)
NM_001257352 (RefSeq)
cattle PKD1 504986 (Entrez Gene)
Chr25 XP_003584052 (RefSeq)
dog PKD1 606755 (Entrez Gene)
Chr6 NP_001006651 (RefSeq)
NM_001006650 (RefSeq)
chicken PKD1 416553 (Entrez Gene)
Chr14 XP_414854 (RefSeq)
western clawed frog pkd1 100494429 (Entrez Gene)
ChrUN XP_002932517 (RefSeq)
zebrafish LOC100149562 100149562 (Entrez Gene)
Chr1 XP_003197787 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory