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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2495

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TNFSF4 HGNC:11934 (HGNC)
7292 (Entrez Gene)
603594 (OMIM)
Chr1 q25 Chr1:173183731-173207332 (-)
GRCh38
Myocardial Infarction, Susceptibility to
P23510 (UniProt | EBI)
NM_003326 (RefSeq)
mouse Tnfsf4 MGI:104511 (MGI)
22164 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 69.75 cM Chr1:161395409-161418410 (+)
GRCm38
Diabetes Mellitus, Insulin-Dependent; IDDM
OTTMUSG00000042461 (VEGA)
OTTMUSP00000062822 (VEGA)
OTTMUST00000111962 (VEGA)
rat Tnfsf4 89814 (Entrez Gene)
Chr13 q22 Q9Z2P3 (UniProt | EBI)
NM_053552 (RefSeq)
chimpanzee TNFSF4 469586 (Entrez Gene)
Chr1 XP_001148146 (RefSeq)
rhesus macaque TNFSF4 706255 (Entrez Gene)
Chr1 XP_001101190 (RefSeq)
cattle TNFSF4 539800 (Entrez Gene)
Chr16 NP_001192644 (RefSeq)
NM_001205715 (RefSeq)
dog TNFSF4 100855878 (Entrez Gene)
Chr7 XP_003639215 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory