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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
24919

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPRED1 HGNC:20249 (HGNC)
161742 (Entrez Gene)
609291 (OMIM)
Chr15 q14 Chr15:38252724-38357249 (+)
GRCh38
Legius Syndrome
Q7Z699 (UniProt | EBI)
NM_152594 (RefSeq)
mouse Spred1 MGI:2150016 (MGI)
114715 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 59.03 cM Chr2:117121374-117182279 (+)
GRCm38
Legius Syndrome
OTTMUSG00000015239 (VEGA)
OTTMUSP00000016218 (VEGA)
OTTMUST00000036098 (VEGA)
rat Spred1 296072 (Entrez Gene)
Chr3 q35 NP_001040554 (RefSeq)
NM_001047089 (RefSeq)
chimpanzee SPRED1 467654 (Entrez Gene)
Chr15 XP_001138171 (RefSeq)
cattle SPRED1 519882 (Entrez Gene)
Chr10 NP_001179445 (RefSeq)
NM_001192516 (RefSeq)
dog SPRED1 487485 (Entrez Gene)
Chr30 XP_544609 (RefSeq)
chicken SPRED1 423292 (Entrez Gene)
Chr5 NP_001186638 (RefSeq)
NM_001199709 (RefSeq)
western clawed frog spred1 493399 (Entrez Gene)
ChrUN Q66JG9 (UniProt | EBI)
NM_001008036 (RefSeq)
zebrafish spred1 406513 (Entrez Gene)
Chr17 NP_998397 (RefSeq)
NM_213232 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/02/2014
MGI 5.19
The Jackson Laboratory