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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2421

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TFAP2A HGNC:11742 (HGNC)
7020 (Entrez Gene)
107580 (OMIM)
Chr6 p24 Chr6:10396677-10419564 (-)
GRCh38
Branchiooculofacial Syndrome; BOFS
P05549 (UniProt | EBI)
NM_001032280 (RefSeq)
mouse Tfap2a MGI:104671 (MGI)
21418 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 20.01 cM Chr13:40715675-40733823 (-)
GRCm38
21418 (NCBI Gene Model)
P34056 (UniProt | EBI)
NM_001122948 (RefSeq)
rat Tfap2a 306862 (Entrez Gene)
Chr17 p12 P58197 (UniProt | EBI)
NM_001107345 (RefSeq)
chimpanzee TFAP2A 462426 (Entrez Gene)
Chr6 XP_001166685 (RefSeq)
rhesus macaque TFAP2A 700663 (Entrez Gene)
Chr4 XP_001089006 (RefSeq)
cattle TFAP2A 505849 (Entrez Gene)
Chr23 A1A4R9 (UniProt | EBI)
NM_001080228 (RefSeq)
dog LOC488213 488213 (Entrez Gene)
Chr35 XP_848968 (RefSeq)
chicken TFAP2A 395982 (Entrez Gene)
Chr2 NP_990425 (RefSeq)
NM_205094 (RefSeq)
western clawed frog tfap2a 395064 (Entrez Gene)
ChrUN NP_001032335 (RefSeq)
NM_001037258 (RefSeq)
zebrafish tfap2a 140618 (Entrez Gene)
Chr24 NP_789829 (RefSeq)
NM_176859 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory