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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2407

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TCF4 HGNC:11634 (HGNC)
6925 (Entrez Gene)
602272 (OMIM)
Chr18 q21.1 Chr18:55222331-55635957 (-)
GRCh38
Pitt-Hopkins Syndrome; PTHS
P15884 (UniProt | EBI)
NM_003199 (RefSeq)
mouse Tcf4 MGI:98506 (MGI)
21413 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 43.23 cM Chr18:69344146-69687925 (+)
GRCm38
OTTMUSG00000021071 (VEGA)
OTTMUSP00000023178 (VEGA)
OTTMUST00000049864 (VEGA)
rat Tcf4 84382 (Entrez Gene)
Chr18 q12.1 Q62655 (UniProt | EBI)
NM_053369 (RefSeq)
rhesus macaque TCF4 695814 (Entrez Gene)
Chr18 XP_001084466 (RefSeq)
cattle TCF4 534935 (Entrez Gene)
Chr24 NP_001029793 (RefSeq)
NM_001034621 (RefSeq)
dog TCF4 403949 (Entrez Gene)
Chr1 P15881 (UniProt | EBI)
NM_001003268 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory