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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
2401

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TAPBP HGNC:11566 (HGNC)
6892 (Entrez Gene)
601962 (OMIM)
Chr6 p21.3 Chr6:33299694-33314387 (-)
GRCh38
Bare Lymphocyte Syndrome, Type I
O15533 (UniProt | EBI)
NM_003190 (RefSeq)
mouse Tapbp MGI:1201689 (MGI)
21356 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 17.98 cM Chr17:33915899-33929288 (+)
GRCm38
OTTMUSG00000037070 (VEGA)
OTTMUSP00000053220 (VEGA)
OTTMUST00000095370 (VEGA)
rat Tapbp 25217 (Entrez Gene)
Chr20 p12 NP_149089 (RefSeq)
NM_033098 (RefSeq)
chimpanzee TAPBP 746814 (Entrez Gene)
Chr6 XP_001170532 (RefSeq)
rhesus macaque TAPBP 718235 (Entrez Gene)
Chr4 NP_001248656 (RefSeq)
NM_001261727 (RefSeq)
cattle TAPBP 504335 (Entrez Gene)
Chr23 NP_001039350 (RefSeq)
NM_001045885 (RefSeq)
dog TAPBP 481740 (Entrez Gene)
Chr12 Q5TJE4 (UniProt | EBI)
NM_001048101 (RefSeq)
chicken TAPBP 417048 (Entrez Gene)
Chr16 O73895 (UniProt | EBI)
NM_001034816 (RefSeq)
zebrafish si:ch211-51f10.1 100034470 (Entrez Gene)
Chr19 NP_001124083 (RefSeq)
NM_001130611 (RefSeq)
tapbp 30163 (Entrez Gene)
Chr19 NP_571049 (RefSeq)
NM_130974 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory