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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2393

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human T HGNC:11515 (HGNC)
6862 (Entrez Gene)
601397 (OMIM)
HGNC homology
Chr6 q27 Chr6:166157656-166168669 (-)
GRCh38.p2
Neural Tube Defects, Susceptibility To; NTD
Sacral Agenesis with Vertebral Anomalies; SAVA
O15178 (UniProt | EBI)
NM_003181 (RefSeq)
mouse T MGI:98472 (MGI)
20997 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 4.92 cM Chr17:8434423-8442496 (+)
GRCm38
OTTMUSG00000026263 (VEGA)
OTTMUSP00000032305 (VEGA)
OTTMUST00000064950 (VEGA)
rat T 292301 (Entrez Gene)
Chr1 q11 NP_001099679 (RefSeq)
NM_001106209 (RefSeq)
chimpanzee T 472186 (Entrez Gene)
Chr6 XP_009450643 (RefSeq)
rhesus macaque T 705706 (Entrez Gene)
Chr4 XP_001101421 (RefSeq)
cattle T 524443 (Entrez Gene)
Chr9 NP_001179914 (RefSeq)
NM_001192985 (RefSeq)
dog T 403653 (Entrez Gene)
Chr1 Q9GL27 (UniProt | EBI)
NM_001003092 (RefSeq)
chicken T 395782 (Entrez Gene)
Chr3 P79777 (UniProt | EBI)
NM_204940 (RefSeq)
western clawed frog t 493501 (Entrez Gene)
ChrUN NP_001008139 (RefSeq)
NM_001008138 (RefSeq)
zebrafish tb 100004296 (Entrez Gene)
Chr13 XP_001343633 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory