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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
239

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PEPD HGNC:8840 (HGNC)
5184 (Entrez Gene)
613230 (OMIM)
Chr19 q13.11 Chr19:33386949-33521893 (-)
GRCh38
Prolidase Deficiency
P12955 (UniProt | EBI)
NM_000285 (RefSeq)
mouse Pepd MGI:97542 (MGI)
18624 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 20.7 cM Chr7:34912379-35044710 (+)
GRCm38
OTTMUSG00000031826 (VEGA)
OTTMUSP00000042019 (VEGA)
OTTMUST00000078912 (VEGA)
rat Pepd 292808 (Entrez Gene)
Chr1 q21 Q5I0D7 (UniProt | EBI)
NM_001009641 (RefSeq)
chimpanzee PEPD 455932 (Entrez Gene)
Chr19 NP_001267459 (RefSeq)
NM_001280530 (RefSeq)
rhesus macaque PEPD 717332 (Entrez Gene)
Chr19 XP_001108725 (RefSeq)
cattle PEPD 615158 (Entrez Gene)
Chr18 NP_001073787 (RefSeq)
NM_001080318 (RefSeq)
dog PEPD 476493 (Entrez Gene)
Chr1 XP_533702 (RefSeq)
chicken PEPD 415776 (Entrez Gene)
Chr11 NP_001073185 (RefSeq)
NM_001079717 (RefSeq)
zebrafish pepd 337498 (Entrez Gene)
Chr18 NP_944594 (RefSeq)
NM_198912 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory