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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23741

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HMCN1 HGNC:19194 (HGNC)
83872 (Entrez Gene)
608548 (OMIM)
Chr1 q25.3-q31.1 Chr1:185734551-186190953 (+)
GRCh38
Macular Degeneration, Age-Related, 1; ARMD1
Q96RW7 (UniProt | EBI)
NM_031935 (RefSeq)
mouse Hmcn1 MGI:2685047 (MGI)
545370 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 63.84 cM Chr1:150562524-150993435 (-)
GRCm38
OTTMUSG00000021664 (VEGA)
OTTMUSP00000024195 (VEGA)
OTTMUST00000051425 (VEGA)
rat Hmcn1 289094 (Entrez Gene)
Chr13 q21 NP_001258221 (RefSeq)
NM_001271292 (RefSeq)
chimpanzee HMCN1 457586 (Entrez Gene)
Chr1 XP_514061 (RefSeq)
cattle HMCN1 521326 (Entrez Gene)
Chr16 NP_001179466 (RefSeq)
NM_001192537 (RefSeq)
dog HMCN1 490318 (Entrez Gene)
Chr7 XP_547438 (RefSeq)
chicken HMCN1 429823 (Entrez Gene)
Chr8 XP_003643223 (RefSeq)
zebrafish hmcn1 559150 (Entrez Gene)
Chr20 NP_001177233 (RefSeq)
NM_001190304 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory