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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23686

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VMP1 HGNC:29559 (HGNC)
81671 (Entrez Gene)
611753 (OMIM)
TMEM49 (MyGene.info)
HGNC homology
Chr17 q23.1 Chr17:59707502-59840593 (+)
GRCh38.p7
Q96GC9 (UniProt | EBI)
NM_001329395 (RefSeq)
mouse Vmp1 MGI:1923159 (MGI)
75909 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 51.82 cM Chr11:86583854-86683822 (-)
GRCm38
75909 (NCBI Gene Model)
Q99KU0 (UniProt | EBI)
NM_029478 (RefSeq)
rat Vmp1 192129 (Entrez Gene)
Chr10 q26 Q91ZQ0 (UniProt | EBI)
NM_138839 (RefSeq)
chimpanzee VMP1 455171 (Entrez Gene)
Chr17 NP_001229540 (RefSeq)
NM_001242611 (RefSeq)
cattle VMP1 508631 (Entrez Gene)
Chr19 Q0VCK9 (UniProt | EBI)
NM_001075368 (RefSeq)
dog VMP1 491120 (Entrez Gene)
Chr9
chicken VMP1 417635 (Entrez Gene)
Chr19 XP_015151625 (RefSeq)
zebrafish vmp1 336789 (Entrez Gene)
Chr15 Q6NYY9 (UniProt | EBI)
NM_207060 (RefSeq)
frog, western clawed vmp1 493262 (Entrez Gene)
Chr2 Q68EQ9 (UniProt | EBI)
NM_001007876 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory