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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA3D HGNC:10726 (HGNC)
223117 (Entrez Gene)
609907 (OMIM)
HGNC homology
Chr7 q21.11 Chr7:84995192-85187176 (-)
O95025 (UniProt | EBI)
NM_152754 (RefSeq)
mouse Sema3d MGI:1860118 (MGI)
108151 (Entrez Gene)
Gene Tree
HGNC homology
Chr5 3.97 cM Chr5:12383385-12588948 (+)
OTTMUSG00000054617 (VEGA)
OTTMUSP00000071658 (VEGA)
OTTMUST00000135405 (VEGA)
rat Sema3d 246262 (Entrez Gene)
Chr4 q12 NP_001098103 (RefSeq)
NM_001104633 (RefSeq)
chimpanzee SEMA3D 472431 (Entrez Gene)
cattle SEMA3D 536417 (Entrez Gene)
Chr4 NP_001193025 (RefSeq)
NM_001206096 (RefSeq)
dog SEMA3D 475929 (Entrez Gene)
Chr18 XP_013976311 (RefSeq)
chicken SEMA3D 396332 (Entrez Gene)
Chr1 Q90663 (UniProt | EBI)
NM_205373 (RefSeq)
zebrafish sema3d 30250 (Entrez Gene)
Chr18 Q9W6G6 (UniProt | EBI)
NM_131048 (RefSeq)
frog, western clawed sema3d 100492784 (Entrez Gene)
Chr3 XP_017947821 (RefSeq)
macaque, rhesus SEMA3D 707146 (Entrez Gene)
Chr3 XP_001107897 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory