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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23595

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSPAN11 HGNC:30795 (HGNC)
441631 (Entrez Gene)
HGNC homology
Chr12 p11.21 Chr12:30926433-31016502 (+)
GRCh38.p7
A1L157 (UniProt | EBI)
NM_001080509 (RefSeq)
mouse Tspan11 MGI:1915748 (MGI)
68498 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 62.56 cM Chr6:127887599-127953031 (+)
GRCm38
68498 (NCBI Gene Model)
Q9D1D1 (UniProt | EBI)
NM_026743 (RefSeq)
rat Tspan11 312727 (Entrez Gene)
Chr4 q42 Q568Y5 (UniProt | EBI)
NM_001024262 (RefSeq)
chimpanzee TSPAN11 737547 (Entrez Gene)
Chr12 XP_016779191 (RefSeq)
cattle TSPAN11 616660 (Entrez Gene)
Chr5 Q0VC33 (UniProt | EBI)
NM_001080325 (RefSeq)
dog TSPAN11 611819 (Entrez Gene)
Chr27 XP_022266625 (RefSeq)
zebrafish tspan11 564029 (Entrez Gene)
Chr4 NP_001038502 (RefSeq)
NM_001045037 (RefSeq)
frog, western clawed LOC101732684 101732684 (Entrez Gene)
Chr3 XP_004913226 (RefSeq)
macaque, rhesus TSPAN11 694030 (Entrez Gene)
Chr11 NP_001180628 (RefSeq)
NM_001193699 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory