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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23395

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human UPF3A HGNC:20332 (HGNC)
65110 (Entrez Gene)
605530 (OMIM)
UPF3A (MyGene.info)
HGNC homology
Chr13 q34 Chr13:114281584-114305817 (+)
GRCh38.p7
Q9H1J1 (UniProt | EBI)
NM_001353647 (RefSeq)
mouse Upf3a MGI:1914281 (MGI)
67031 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 6.38 cM Chr8:13785615-13799193 (+)
GRCm38
ENSMUSG00000038398 (Ensembl Gene Model)
ENSMUSP00000037354 (Ensembl)
ENSMUST00000043767 (Ensembl)
rat Upf3a 361176 (Entrez Gene)
Chr16 q12.5 NP_001012159 (RefSeq)
NM_001012159 (RefSeq)
chimpanzee LOC750926 750926 (Entrez Gene)
ChrUN
cattle UPF3A 529442 (Entrez Gene)
Chr12 XP_005214110 (RefSeq)
dog UPF3A 607836 (Entrez Gene)
Chr22 XP_022263910 (RefSeq)
chicken UPF3A 418734 (Entrez Gene)
Chr1 XP_416933 (RefSeq)
zebrafish upf3a 566608 (Entrez Gene)
Chr9 B0S733 (UniProt | EBI)
NM_001202448 (RefSeq)
frog, western clawed upf3a 100492664 (Entrez Gene)
Chr2 XP_002937909 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory