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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
2336

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SORL1 HGNC:11185 (HGNC)
6653 (Entrez Gene)
602005 (OMIM)
Chr11 q23.2-q24.2 Chr11:121452203-121633762 (+)
GRCh38
Alzheimer Disease; AD
Q92673 (UniProt | EBI)
NM_003105 (RefSeq)
mouse Sorl1 MGI:1202296 (MGI)
20660 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 23.55 cM Chr9:41964720-42124297 (-)
GRCm38
OTTMUSG00000031794 (VEGA)
OTTMUSP00000041931 (VEGA)
OTTMUST00000078792 (VEGA)
chimpanzee SORL1 451626 (Entrez Gene)
Chr11 XP_003313440 (RefSeq)
rhesus macaque SORL1 713011 (Entrez Gene)
Chr14 XP_001102178 (RefSeq)
cattle SORL1 533166 (Entrez Gene)
Chr15 NP_001179686 (RefSeq)
NM_001192757 (RefSeq)
dog SORL1 479408 (Entrez Gene)
Chr5 XP_536545 (RefSeq)
chicken SORL1 395998 (Entrez Gene)
Chr24 Q98930 (UniProt | EBI)
zebrafish sorl1 497306 (Entrez Gene)
Chr15 XP_003200086 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory