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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23181

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TLX3 HGNC:13532 (HGNC)
30012 (Entrez Gene)
604640 (OMIM)
Chr5 q35.1 Chr5:171309284-171312134 (+)
GRCh38
O43711 (UniProt | EBI)
NM_021025 (RefSeq)
mouse Tlx3 MGI:1351209 (MGI)
27140 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 19.21 cM Chr11:33200752-33203589 (-)
GRCm38
Central Hypoventilation Syndrome, Congenital; CCHS
OTTMUSG00000005392 (VEGA)
OTTMUSP00000005571 (VEGA)
OTTMUST00000012022 (VEGA)
rat Tlx3 497881 (Entrez Gene)
Chr10 q12 XP_001064411 (RefSeq)
rhesus macaque TLX3 701703 (Entrez Gene)
Chr6 XP_001095250 (RefSeq)
cattle TLX3 618473 (Entrez Gene)
Chr20 NP_001180120 (RefSeq)
NM_001193191 (RefSeq)
dog TLX3 489123 (Entrez Gene)
Chr4 XP_546241 (RefSeq)
western clawed frog tlx3 548656 (Entrez Gene)
ChrUN NP_001015902 (RefSeq)
NM_001015902 (RefSeq)
zebrafish tlx3b 266965 (Entrez Gene)
Chr10 NP_739572 (RefSeq)
NM_170766 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory