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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
23162

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTBP2 HGNC:17662 (HGNC)
58155 (Entrez Gene)
608449 (OMIM)
PTBP2 (MyGene.info)
HGNC homology
Chr1 p21.3 Chr1:96721605-96815049 (+)
GRCh38.p7
Q9UKA9 (UniProt | EBI)
NM_001300988 (RefSeq)
mouse Ptbp2 MGI:1860489 (MGI)
56195 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 52.18 cM Chr3:119718742-119784466 (-)
GRCm38
ENSMUSG00000028134 (Ensembl Gene Model)
ENSMUSP00000029780 (Ensembl)
ENSMUST00000029780 (Ensembl)
rat Ptbp2 310820 (Entrez Gene)
Chr2 q41 Q66H20 (UniProt | EBI)
NM_001005555 (RefSeq)
chimpanzee PTBP2 457046 (Entrez Gene)
Chr1 XP_024203050 (RefSeq)
dog PTBP2 490149 (Entrez Gene)
Chr6 XP_005621933 (RefSeq)
chicken PTBP2 424479 (Entrez Gene)
Chr8 XP_025008828 (RefSeq)
zebrafish ptbp2b 562434 (Entrez Gene)
Chr2 NP_001093477 (RefSeq)
NM_001100007 (RefSeq)
frog, western clawed ptbp2 779934 (Entrez Gene)
Chr4 NP_001072479 (RefSeq)
NM_001079011 (RefSeq)
macaque, rhesus PTBP2 710101 (Entrez Gene)
Chr1 XP_015001018 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory