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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NLGN3 HGNC:14289 (HGNC)
54413 (Entrez Gene)
300336 (OMIM)
NLGN3 (MyGene.info)
HGNC homology
ChrX q13.1 ChrX:71144389-71175307 (+)
Asperger syndrome
autistic disorder
Q9NZ94 (UniProt | EBI)
NM_001321276 (RefSeq)
mouse Nlgn3 MGI:2444609 (MGI)
245537 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 43.95 cM ChrX:101299168-101325963 (+)
autistic disorder
OTTMUSG00000018201 (VEGA)
OTTMUSP00000019733 (VEGA)
OTTMUST00000043942 (VEGA)
rat Nlgn3 171297 (Entrez Gene)
ChrX q22 Q62889 (UniProt | EBI)
NM_134336 (RefSeq)
chimpanzee NLGN3 473660 (Entrez Gene)
ChrX XP_016798852 (RefSeq)
cattle NLGN3 511251 (Entrez Gene)
ChrX NP_001068972 (RefSeq)
NM_001075504 (RefSeq)
dog NLGN3 491947 (Entrez Gene)
ChrX XP_005641518 (RefSeq)
chicken NLGN3 770104 (Entrez Gene)
Chr4 NP_001166992 (RefSeq)
NM_001173521 (RefSeq)
zebrafish nlgn3a 562702 (Entrez Gene)
Chr14 NP_001159804 (RefSeq)
NM_001166332 (RefSeq)
frog, western clawed nlgn3 100329188 (Entrez Gene)
Chr8 NP_001165298 (RefSeq)
NM_001171827 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory