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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2308

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMARCA2 HGNC:11098 (HGNC)
6595 (Entrez Gene)
600014 (OMIM)
Chr9 p22.3 Chr9:2015219-2193624 (+)
GRCh38
Nicolaides-Baraitser Syndrome; NCBRS
P51531 (UniProt | EBI)
NM_003070 (RefSeq)
mouse Smarca2 MGI:99603 (MGI)
67155 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 21.17 cM Chr19:26605115-26778321 (+)
GRCm38
OTTMUSG00000040069 (VEGA)
OTTMUSP00000058196 (VEGA)
OTTMUST00000104061 (VEGA)
rat Smarca2 361745 (Entrez Gene)
Chr1 q51 NP_001004446 (RefSeq)
NM_001004446 (RefSeq)
chimpanzee SMARCA2 464965 (Entrez Gene)
Chr9 XP_003951484 (RefSeq)
cattle SMARCA2 540904 (Entrez Gene)
Chr8 NP_001092585 (RefSeq)
NM_001099115 (RefSeq)
dog SMARCA2 476335 (Entrez Gene)
Chr1 XP_850159 (RefSeq)
chicken SMARCA2 396040 (Entrez Gene)
ChrZ NP_990470 (RefSeq)
NM_205139 (RefSeq)
western clawed frog smarca2 734002 (Entrez Gene)
ChrUN XP_002941055 (RefSeq)
zebrafish smarca2 334032 (Entrez Gene)
Chr5 NP_001038240 (RefSeq)
NM_001044775 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/02/2014
MGI 5.19
The Jackson Laboratory