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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2303

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLIT3 HGNC:11087 (HGNC)
6586 (Entrez Gene)
603745 (OMIM)
Chr5 q35 Chr5:168661733-169301129 (-)
GRCh38
O75094 (UniProt | EBI)
NM_003062 (RefSeq)
mouse Slit3 MGI:1315202 (MGI)
20564 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 20.29 cM Chr11:35121224-35708507 (+)
GRCm38
Diaphragmatic Hernia, Congenital
OTTMUSG00000005411 (VEGA)
OTTMUSP00000005590 (VEGA)
OTTMUST00000012061 (VEGA)
rat Slit3 83467 (Entrez Gene)
Chr10 q12 O88280 (UniProt | EBI)
NM_031321 (RefSeq)
chimpanzee SLIT3 462359 (Entrez Gene)
Chr5 XP_009448378 (RefSeq)
rhesus macaque LOC703950 703950 (Entrez Gene)
Chr6 XP_002808486 (RefSeq)
cattle SLIT3 615883 (Entrez Gene)
Chr20 NP_001178379 (RefSeq)
NM_001191450 (RefSeq)
dog SLIT3 489132 (Entrez Gene)
Chr4 XP_005619283 (RefSeq)
chicken SLIT3 374173 (Entrez Gene)
Chr13 NP_001183971 (RefSeq)
NM_001197042 (RefSeq)
western clawed frog slit3 780195 (Entrez Gene)
ChrUN NP_001072738 (RefSeq)
NM_001079270 (RefSeq)
zebrafish slit3 80354 (Entrez Gene)
Chr14 NP_571811 (RefSeq)
NM_131736 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory