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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22955

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPC4 HGNC:12336 (HGNC)
7223 (Entrez Gene)
603651 (OMIM)
Chr13 q13.3 Chr13:37636636-37869802 (-)
GRCh38
Q9UBN4 (UniProt | EBI)
NM_016179 (RefSeq)
mouse Trpc4 MGI:109525 (MGI)
22066 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 25.43 cM Chr3:54156057-54318470 (+)
GRCm38
ENSMUSG00000027748 (Ensembl Gene Model)
ENSMUSP00000029311 (Ensembl)
ENSMUST00000029311 (Ensembl)
rat Trpc4 84494 (Entrez Gene)
Chr2 q26 O35119 (UniProt | EBI)
NM_080396 (RefSeq)
chimpanzee TRPC4 452544 (Entrez Gene)
Chr13 XP_509635 (RefSeq)
cattle TRPC4 282102 (Entrez Gene)
Chr12 P79100 (UniProt | EBI)
NM_174478 (RefSeq)
dog TRPC4 486004 (Entrez Gene)
Chr25 XP_543129 (RefSeq)
chicken TRPC4 418895 (Entrez Gene)
Chr1 XP_417089 (RefSeq)
western clawed frog trpc4 100485338 (Entrez Gene)
ChrUN XP_002939629 (RefSeq)
zebrafish trpc4 566436 (Entrez Gene)
Chr15 XP_001920781 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory