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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22848

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPM1E HGNC:19322 (HGNC)
22843 (Entrez Gene)
HGNC homology
Chr17 q22 Chr17:58755869-58985617 (+)
GRCh38.p7
Q8WY54 (UniProt | EBI)
NM_014906 (RefSeq)
mouse Ppm1e MGI:2444096 (MGI)
320472 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 51.99 cM Chr11:87226906-87358994 (-)
GRCm38
320472 (NCBI Gene Model)
Q80TL0 (UniProt | EBI)
NM_177167 (RefSeq)
rat Ppm1e 360593 (Entrez Gene)
Chr10 q26 Q80Z30 (UniProt | EBI)
NM_198773 (RefSeq)
chimpanzee PPM1E 468424 (Entrez Gene)
Chr17 XP_016786325 (RefSeq)
cattle PPM1E 532050 (Entrez Gene)
Chr19 XP_024836372 (RefSeq)
dog PPM1E 612897 (Entrez Gene)
Chr9 XP_853253 (RefSeq)
chicken PPM1E 417627 (Entrez Gene)
Chr19 XP_415871 (RefSeq)
zebrafish ppm1e 553417 (Entrez Gene)
Chr10 NP_001018354 (RefSeq)
NM_001020518 (RefSeq)
frog, western clawed ppm1e 100496571 (Entrez Gene)
Chr2 XP_002934392 (RefSeq)
macaque, rhesus PPM1E 711012 (Entrez Gene)
Chr16 XP_014974613 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory