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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22828

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPM1F HGNC:19388 (HGNC)
9647 (Entrez Gene)
Chr22 q11.22 Chr22:21919419-21952878 (-)
GRCh38
P49593 (UniProt | EBI)
NM_014634 (RefSeq)
mouse Ppm1f MGI:1918464 (MGI)
68606 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 10.48 cM Chr16:16896469-16927364 (+)
GRCm38
OTTMUSG00000023702 (VEGA)
OTTMUSP00000027985 (VEGA)
OTTMUST00000057880 (VEGA)
rat Ppm1f 287931 (Entrez Gene)
Chr11 q23 Q9WVR7 (UniProt | EBI)
NM_175755 (RefSeq)
chimpanzee PPM1F 100611485 (Entrez Gene)
Chr22 XP_003317173 (RefSeq)
rhesus macaque PPM1F 698441 (Entrez Gene)
Chr10 XP_001089477 (RefSeq)
cattle PPM1F 618210 (Entrez Gene)
Chr17 XP_875630 (RefSeq)
dog PPM1F 486448 (Entrez Gene)
Chr26 XP_543574 (RefSeq)
chicken PPM1F 416772 (Entrez Gene)
Chr15 XP_415067 (RefSeq)
zebrafish ppm1f 553757 (Entrez Gene)
Chr5 NP_001018165 (RefSeq)
NM_001018155 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory