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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22818

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPM5 HGNC:14323 (HGNC)
29850 (Entrez Gene)
604600 (OMIM)
Chr11 p15.5 Chr11:2404515-2423402 (-)
GRCh38
Q9NZQ8 (UniProt | EBI)
NM_014555 (RefSeq)
mouse Trpm5 MGI:1861718 (MGI)
56843 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 88.11 cM Chr7:143069153-143094642 (-)
GRCm38
OTTMUSG00000022683 (VEGA)
OTTMUSP00000025953 (VEGA)
OTTMUST00000054375 (VEGA)
rat Trpm5 365391 (Entrez Gene)
Chr1 q41 NP_001178825 (RefSeq)
NM_001191896 (RefSeq)
chimpanzee TRPM5 466320 (Entrez Gene)
Chr11 XP_009457976 (RefSeq)
rhesus macaque TRPM5 705070 (Entrez Gene)
Chr14 XP_001093334 (RefSeq)
cattle TRPM5 100299596 (Entrez Gene)
Chr29 XP_002699492 (RefSeq)
dog TRPM5 483668 (Entrez Gene)
Chr18 XP_005631408 (RefSeq)
chicken TRPM5 423091 (Entrez Gene)
Chr5 XP_003641369 (RefSeq)
zebrafish trpm5 557722 (Entrez Gene)
Chr7 NP_001121711 (RefSeq)
NM_001128239 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory