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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
22806

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AIPL1 HGNC:359 (HGNC)
23746 (Entrez Gene)
604392 (OMIM)
Chr17 p13.1 Chr17:6423737-6435199 (-)
GRCh38
Leber Congenital Amaurosis 4; LCA4
Retinitis Pigmentosa; RP
Q9NZN9 (UniProt | EBI)
NM_014336 (RefSeq)
mouse Aipl1 MGI:2148800 (MGI)
114230 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 43.81 cM Chr11:72027963-72037509 (-)
GRCm38
Leber Congenital Amaurosis 4; LCA4
OTTMUSG00000006096 (VEGA)
OTTMUSP00000006382 (VEGA)
OTTMUST00000013772 (VEGA)
rat Aipl1 59110 (Entrez Gene)
Chr10 q24 Q9JLG9 (UniProt | EBI)
NM_021590 (RefSeq)
chimpanzee AIPL1 468171 (Entrez Gene)
Chr17 XP_001167495 (RefSeq)
rhesus macaque AIPL1 574331 (Entrez Gene)
Chr16 Q95MP0 (UniProt | EBI)
NM_001032932 (RefSeq)
dog AIPL1 489447 (Entrez Gene)
Chr5 XP_546565 (RefSeq)
chicken AIPL1 769785 (Entrez Gene)
Chr4 XP_001233085 (RefSeq)
zebrafish LOC100537095 100537095 (Entrez Gene)
Chr15 XP_003200100 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory