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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22775

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SRR HGNC:14398 (HGNC)
63826 (Entrez Gene)
606477 (OMIM)
Chr17 p13 Chr17:2303371-2325259 (+)
GRCh38
Q9GZT4 (UniProt | EBI)
NM_021947 (RefSeq)
mouse Srr MGI:1351636 (MGI)
27364 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 45.76 cM Chr11:74906509-74925948 (-)
GRCm38
Schizophrenia; SCZD
OTTMUSG00000006189 (VEGA)
OTTMUSP00000006479 (VEGA)
OTTMUST00000013949 (VEGA)
rat Srr 303306 (Entrez Gene)
Chr10 q24 Q76EQ0 (UniProt | EBI)
NM_198757 (RefSeq)
chimpanzee SRR 747543 (Entrez Gene)
Chr17 XP_001156186 (RefSeq)
rhesus macaque SRR 703426 (Entrez Gene)
Chr16 XP_001087081 (RefSeq)
cattle SRR 525340 (Entrez Gene)
Chr19 A0JNI4 (UniProt | EBI)
NM_001077965 (RefSeq)
chicken SRR 771635 (Entrez Gene)
Chr19 XP_001234891 (RefSeq)
western clawed frog srr 100144980 (Entrez Gene)
ChrUN NP_001120018 (RefSeq)
NM_001126546 (RefSeq)
zebrafish si:ch73-263o4.3 100331432 (Entrez Gene)
Chr4 XP_002661510 (RefSeq)
si:ch73-263o4.4 100331498 (Entrez Gene)
Chr4 XP_002661511 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory