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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SFTPC HGNC:10802 (HGNC)
6440 (Entrez Gene)
178620 (OMIM)
HGNC homology
Chr8 p21.3 Chr8:22161671-22164479 (+)
idiopathic pulmonary fibrosis
pulmonary alveolar proteinosis
P11686 (UniProt | EBI)
NM_001317780 (RefSeq)
mouse Sftpc MGI:109517 (MGI)
20389 (Entrez Gene)
Gene Tree
HGNC homology
Chr14 36.32 cM Chr14:70520949-70524081 (-)
desquamative interstitial pneumonia
ENSMUSG00000022097 (Ensembl Gene Model)
ENSMUSP00000022692 (Ensembl)
ENSMUST00000022692 (Ensembl)
rat Sftpc 50683 (Entrez Gene)
Chr15 p11 P11685 (UniProt | EBI)
NM_017342 (RefSeq)
chimpanzee SFTPC 464041 (Entrez Gene)
Chr8 XP_009453249 (RefSeq)
cattle SFTPC 282071 (Entrez Gene)
Chr8 P15783 (UniProt | EBI)
NM_174462 (RefSeq)
dog SFTPC 477385 (Entrez Gene)
Chr25 P22397 (UniProt | EBI)
XM_534578 (RefSeq)
frog, western clawed sftpc 100038236 (Entrez Gene)
Chr3 NP_001122132 (RefSeq)
NM_001128660 (RefSeq)
macaque, rhesus SFTPC 707696 (Entrez Gene)
Chr8 P55152 (UniProt | EBI)
NM_001042759 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory