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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22669

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MMP17 HGNC:7163 (HGNC)
4326 (Entrez Gene)
602285 (OMIM)
Chr12 q24.3 Chr12:131828396-131851771 (+)
GRCh38
Q9ULZ9 (UniProt | EBI)
NM_016155 (RefSeq)
mouse Mmp17 MGI:1346076 (MGI)
23948 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 68.18 cM Chr5:129584169-129608875 (+)
GRCm38
OTTMUSG00000042407 (VEGA)
OTTMUSP00000062676 (VEGA)
OTTMUST00000111796 (VEGA)
rat Mmp17 288626 (Entrez Gene)
Chr12 q13 NP_001099395 (RefSeq)
NM_001105925 (RefSeq)
chimpanzee MMP17 452375 (Entrez Gene)
Chr12 XP_509485 (RefSeq)
rhesus macaque LOC100430708 100430708 (Entrez Gene)
Chr11 XP_002798895 (RefSeq)
cattle MMP17 513072 (Entrez Gene)
Chr17 XP_590696 (RefSeq)
dog MMP17 609890 (Entrez Gene)
Chr26 XP_852332 (RefSeq)
chicken MMP17 416801 (Entrez Gene)
Chr15 XP_415092 (RefSeq)
western clawed frog mmp17 100125088 (Entrez Gene)
ChrUN NP_001096469 (RefSeq)
NM_001102999 (RefSeq)
zebrafish mmp17a 570076 (Entrez Gene)
Chr21 XP_698601 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory