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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2256

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SDHC HGNC:10682 (HGNC)
6391 (Entrez Gene)
602413 (OMIM)
Chr1 q23.3 Chr1:161314376-161364751 (+)
GRCh38
Gastrointestinal Stromal Tumor; GIST
Paraganglioma and Gastric Stromal Sarcoma
Paragangliomas 3; PGL3
Q99643 (UniProt | EBI)
NM_003001 (RefSeq)
mouse Sdhc MGI:1913302 (MGI)
66052 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 78.99 cM Chr1:171127165-171150603 (-)
GRCm38
OTTMUSG00000021661 (VEGA)
OTTMUSP00000024190 (VEGA)
OTTMUST00000051420 (VEGA)
rat Sdhc 289217 (Entrez Gene)
Chr13 q24 NP_001005534 (RefSeq)
NM_001005534 (RefSeq)
rhesus macaque LOC701966 701966 (Entrez Gene)
ChrX XP_001093286 (RefSeq)
LOC702309 702309 (Entrez Gene)
Chr8 XP_001093611 (RefSeq)
SDHC 719978 (Entrez Gene)
Chr1 NP_001180516 (RefSeq)
NM_001193587 (RefSeq)
cattle SDHC 327696 (Entrez Gene)
Chr3 P35720 (UniProt | EBI)
NM_175814 (RefSeq)
dog SDHC 478983 (Entrez Gene)
Chr38 XP_536140 (RefSeq)
western clawed frog sdhc 496650 (Entrez Gene)
ChrUN NP_001136371 (RefSeq)
NM_001142899 (RefSeq)
zebrafish sdhc 445129 (Entrez Gene)
Chr2 NP_001003523 (RefSeq)
NM_001003523 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory