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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL11A2 HGNC:2187 (HGNC)
1302 (Entrez Gene)
120290 (OMIM)
COL11A2 (gene) (MyGene.info)
HGNC homology
Chr6 p21.32 Chr6:33162692-33193009 (-)
autosomal dominant nonsyndromic deafness 13
autosomal recessive nonsyndromic deafness 53
otospondylomegaepiphyseal dysplasia
Stickler syndrome
P13942 (UniProt | EBI)
NM_080679 (RefSeq)
mouse Col11a2 MGI:88447 (MGI)
12815 (Entrez Gene)
Gene Tree
HGNC homology
Chr17 17.98 cM Chr17:34039437-34066685 (+)
autosomal dominant nonsyndromic deafness 13
otospondylomegaepiphyseal dysplasia
Stickler syndrome
OTTMUSG00000022512 (VEGA)
OTTMUSP00000025657 (VEGA)
OTTMUST00000053896 (VEGA)
rat Col11a2 294279 (Entrez Gene)
Chr20 NP_997693 (RefSeq)
NM_212528 (RefSeq)
cattle COL11A2 515435 (Entrez Gene)
Chr23 Q32S24 (UniProt | EBI)
NM_001046199 (RefSeq)
dog COL11A2 481734 (Entrez Gene)
Chr12 XP_538855 (RefSeq)
zebrafish col11a2 561679 (Entrez Gene)
Chr19 NP_001073461 (RefSeq)
NM_001079992 (RefSeq)
macaque, rhesus COL11A2 718050 (Entrez Gene)
Chr4 XP_014991585 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory