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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22494

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAX3 HGNC:8617 (HGNC)
5077 (Entrez Gene)
606597 (OMIM)
Chr2 q35 Chr2:222199887-222298996 (-)
GRCh38
Craniofacial-Deafness-Hand Syndrome; CDHS
Rhabdomyosarcoma 2; RMS2
Waardenburg Syndrome, Type 1; WS1
Waardenburg Syndrome, Type 3; WS3
P23760 (UniProt | EBI)
NM_000438 (RefSeq)
mouse Pax3 MGI:97487 (MGI)
18505 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 39.79 cM Chr1:78101267-78197134 (-)
GRCm38
Neural Tube Defects
Rhabdomyosarcoma 2; RMS2
Waardenburg Syndrome, Type 1; WS1
OTTMUSG00000037633 (VEGA)
OTTMUSP00000054372 (VEGA)
OTTMUST00000097090 (VEGA)
rat Pax3 114502 (Entrez Gene)
Chr9 q33 NP_446162 (RefSeq)
NM_053710 (RefSeq)
chimpanzee PAX3 459971 (Entrez Gene)
Chr2B XP_001165390 (RefSeq)
rhesus macaque PAX3 705315 (Entrez Gene)
Chr12 XP_001107509 (RefSeq)
cattle PAX3 540951 (Entrez Gene)
Chr2 NP_001193747 (RefSeq)
NM_001206818 (RefSeq)
dog PAX3 488544 (Entrez Gene)
Chr37 q16-q17 XP_545664 (RefSeq)
chicken PAX3 374127 (Entrez Gene)
Chr9 NP_989600 (RefSeq)
NM_204269 (RefSeq)
western clawed frog pax3 448464 (Entrez Gene)
ChrUN Q28DP6 (UniProt | EBI)
NM_001006775 (RefSeq)
zebrafish pax3a 30532 (Entrez Gene)
Chr2 NP_571352 (RefSeq)
NM_131277 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory