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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAX3 HGNC:8617 (HGNC)
5077 (Entrez Gene)
606597 (OMIM)
PAX3 (MyGene.info)
HGNC homology
Chr2 q36.1 Chr2:222199887-222298996 (-)
alveolar rhabdomyosarcoma
Waardenburg syndrome type 1
Waardenburg syndrome type 3
P23760 (UniProt | EBI)
NM_181461 (RefSeq)
mouse Pax3 MGI:97487 (MGI)
18505 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 39.79 cM Chr1:78101267-78197134 (-)
alveolar rhabdomyosarcoma
neural tube defect
Waardenburg syndrome type 1
OTTMUSG00000037633 (VEGA)
OTTMUSP00000054372 (VEGA)
OTTMUST00000097090 (VEGA)
rat Pax3 114502 (Entrez Gene)
Chr9 q33 NP_446162 (RefSeq)
NM_053710 (RefSeq)
chimpanzee PAX3 459971 (Entrez Gene)
Chr2B XP_016806073 (RefSeq)
cattle PAX3 540951 (Entrez Gene)
Chr2 NP_001193747 (RefSeq)
NM_001206818 (RefSeq)
dog PAX3 488544 (Entrez Gene)
Chr37 q16-q17 XP_013966389 (RefSeq)
chicken PAX3 374127 (Entrez Gene)
Chr9 NP_989600 (RefSeq)
NM_204269 (RefSeq)
zebrafish pax3a 30532 (Entrez Gene)
Chr2 NP_571352 (RefSeq)
NM_131277 (RefSeq)
frog, western clawed pax3 448464 (Entrez Gene)
Chr5 Q28DP6 (UniProt | EBI)
NM_001006775 (RefSeq)
macaque, rhesus PAX3 705315 (Entrez Gene)
Chr12 XP_001107687 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory