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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22461

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HTR5A HGNC:5300 (HGNC)
3361 (Entrez Gene)
601305 (OMIM)
Chr7 q36.1 Chr7:155070324-155087392 (+)
GRCh38
P47898 (UniProt | EBI)
NM_024012 (RefSeq)
mouse Htr5a MGI:96283 (MGI)
15563 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 13.24 cM Chr5:27841947-27855086 (+)
GRCm38
ENSMUSG00000039106 (Ensembl Gene Model)
ENSMUSP00000038884 (Ensembl)
ENSMUST00000036227 (Ensembl)
rat Htr5a 25689 (Entrez Gene)
Chr4 q11 P35364 (UniProt | EBI)
NM_013148 (RefSeq)
chimpanzee HTR5A 463837 (Entrez Gene)
Chr7 XP_519477 (RefSeq)
rhesus macaque HTR5A 716134 (Entrez Gene)
Chr3 NP_001182753 (RefSeq)
NM_001195824 (RefSeq)
cattle HTR5A 541200 (Entrez Gene)
Chr4 NP_001179771 (RefSeq)
NM_001192842 (RefSeq)
dog HTR5A 482814 (Entrez Gene)
Chr16 XP_539929 (RefSeq)
chicken HTR5A 428409 (Entrez Gene)
Chr2 XP_425970 (RefSeq)
western clawed frog htr5a 100487444 (Entrez Gene)
ChrUN XP_002932543 (RefSeq)
zebrafish htr5a 100038775 (Entrez Gene)
Chr2 NP_001119882 (RefSeq)
NM_001126410 (RefSeq)
htr5al 368475 (Entrez Gene)
Chr7 NP_001007122 (RefSeq)
NM_001007121 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory