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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
22422

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL4A5 HGNC:2207 (HGNC)
1287 (Entrez Gene)
303630 (OMIM)
ChrX q22 ChrX:108439771-108697545 (+)
GRCh38
Alport Syndrome, X-Linked; ATS
P29400 (UniProt | EBI)
NM_000495 (RefSeq)
mouse Col4a5 MGI:88456 (MGI)
12830 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 62.16 cM ChrX:141475385-141689234 (+)
GRCm38
Alport Syndrome, X-Linked; ATS
OTTMUSG00000018954 (VEGA)
OTTMUSP00000020465 (VEGA)
OTTMUST00000045528 (VEGA)
rat Col4a5 363457 (Entrez Gene)
ChrX q14 XP_001055156 (RefSeq)
chimpanzee COL4A5 465805 (Entrez Gene)
ChrX XP_003317667 (RefSeq)
rhesus macaque COL4A5 703814 (Entrez Gene)
ChrX XP_001098546 (RefSeq)
chicken COL4A5 422348 (Entrez Gene)
Chr4 XP_420320 (RefSeq)
zebrafish col4a5 323561 (Entrez Gene)
Chr7 NP_001116702 (RefSeq)
NM_001123230 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory