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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2230

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SALL1 HGNC:10524 (HGNC)
6299 (Entrez Gene)
602218 (OMIM)
Chr16 q12.1 Chr16:51135975-51152314 (-)
GRCh38
Townes-Brocks Syndrome; TBS
Q9NSC2 (UniProt | EBI)
NM_002968 (RefSeq)
mouse Sall1 MGI:1889585 (MGI)
58198 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 43.51 cM Chr8:89027248-89044162 (-)
GRCm38
Townes-Brocks Syndrome; TBS
ENSMUSG00000031665 (Ensembl Gene Model)
ENSMUSP00000034090 (Ensembl)
ENSMUST00000034090 (Ensembl)
rat Sall1 307740 (Entrez Gene)
Chr19 p11 NP_001100885 (RefSeq)
NM_001107415 (RefSeq)
chimpanzee SALL1 473281 (Entrez Gene)
Chr16 XP_528651 (RefSeq)
rhesus macaque SALL1 699909 (Entrez Gene)
Chr20 XP_001088338 (RefSeq)
cattle SALL1 514467 (Entrez Gene)
Chr18 NP_001192719 (RefSeq)
NM_001205790 (RefSeq)
dog SALL1 487284 (Entrez Gene)
Chr2 XP_544410 (RefSeq)
chicken SALL1 395446 (Entrez Gene)
Chr11 NP_990038 (RefSeq)
NM_204707 (RefSeq)
western clawed frog sall1 100036618 (Entrez Gene)
ChrUN NP_001090646 (RefSeq)
NM_001097177 (RefSeq)
zebrafish sall1a 555721 (Entrez Gene)
Chr7 NP_001139486 (RefSeq)
NM_001146014 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory