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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2220

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RXRA HGNC:10477 (HGNC)
6256 (Entrez Gene)
180245 (OMIM)
HGNC homology
Chr9 q34.3 Chr9:134326463-134440586 (+)
GRCh38.p2
P19793 (UniProt | EBI)
NM_002957 (RefSeq)
mouse Rxra MGI:98214 (MGI)
20181 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 19.38 cM Chr2:27676440-27762957 (+)
GRCm38
Systemic Lupus Erythematosus; SLE
OTTMUSG00000012047 (VEGA)
OTTMUSP00000012972 (VEGA)
OTTMUST00000028665 (VEGA)
rat Rxra 25271 (Entrez Gene)
Chr3 p12 Q05343 (UniProt | EBI)
NM_012805 (RefSeq)
chimpanzee RXRA 464834 (Entrez Gene)
Chr9 XP_009455937 (RefSeq)
cattle RXRA 507554 (Entrez Gene)
Chr11 NP_001291272 (RefSeq)
NM_001304343 (RefSeq)
dog RXRA 491278 (Entrez Gene)
Chr9 XP_005625216 (RefSeq)
chicken RXRA 417143 (Entrez Gene)
Chr17 XP_003642339 (RefSeq)
western clawed frog rxra 100487877 (Entrez Gene)
ChrUN XP_004916703 (RefSeq)
zebrafish rxraa 555578 (Entrez Gene)
Chr21 A2T929 (UniProt | EBI)
NM_001161551 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory