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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VPS13A HGNC:1908 (HGNC)
23230 (Entrez Gene)
605978 (OMIM)
VPS13A (MyGene.info)
HGNC homology
Chr9 q21.2 Chr9:77177353-77421537 (+)
Q96RL7 (UniProt | EBI)
NM_033305 (RefSeq)
mouse Vps13a MGI:2444304 (MGI)
271564 (Entrez Gene)
Gene Tree
HGNC homology
Chr19 11.71 cM Chr19:16615366-16780933 (-)
ENSMUSG00000046230 (Ensembl Gene Model)
ENSMUSP00000068716 (Ensembl)
ENSMUST00000068156 (Ensembl)
rat Vps13a 309243 (Entrez Gene)
Chr1 q43-q51 NP_001094445 (RefSeq)
NM_001100975 (RefSeq)
chimpanzee VPS13A 464538 (Entrez Gene)
Chr9 XP_016816473 (RefSeq)
cattle LOC100336482 100336482 (Entrez Gene)
Chr8 XP_015320028 (RefSeq)
dog VPS13A 476319 (Entrez Gene)
Chr1 XP_013972938 (RefSeq)
chicken VPS13A 427050 (Entrez Gene)
ChrZ NP_001264765 (RefSeq)
NM_001277836 (RefSeq)
zebrafish vps13a 378837 (Entrez Gene)
Chr8 NP_001112365 (RefSeq)
NM_001118893 (RefSeq)
frog, western clawed vps13a 100488998 (Entrez Gene)
Chr1 XP_012827077 (RefSeq)
macaque, rhesus VPS13A 705323 (Entrez Gene)
Chr15 XP_014973427 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory