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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2179

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RDH5 HGNC:9940 (HGNC)
5959 (Entrez Gene)
601617 (OMIM)
Chr12 q13-q14 Chr12:55720367-55724742 (+)
GRCh38
Fundus Albipunctatus
Q92781 (UniProt | EBI)
NM_002905 (RefSeq)
mouse Rdh5 MGI:1201412 (MGI)
19682 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 77.19 cM Chr10:128913593-128922888 (-)
GRCm38
OTTMUSG00000033473 (VEGA)
OTTMUSP00000045282 (VEGA)
OTTMUST00000084113 (VEGA)
rat Rdh5 366791 (Entrez Gene)
Chr7 q11 XP_002726903 (RefSeq)
chimpanzee RDH5 467029 (Entrez Gene)
Chr12 XP_522429 (RefSeq)
rhesus macaque RDH5 709644 (Entrez Gene)
Chr11 XP_001110917 (RefSeq)
cattle RDH5 281448 (Entrez Gene)
Chr5 Q27979 (UniProt | EBI)
NM_174166 (RefSeq)
dog RDH5 481098 (Entrez Gene)
Chr10 XP_538219 (RefSeq)
chicken RDH5 395452 (Entrez Gene)
ChrUN NP_990044 (RefSeq)
NM_204713 (RefSeq)
western clawed frog rdh5 496830 (Entrez Gene)
ChrUN NP_001011363 (RefSeq)
NM_001011363 (RefSeq)
zebrafish rdh5 556528 (Entrez Gene)
Chr22 NP_001025272 (RefSeq)
NM_001030101 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory