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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2162

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAP1A HGNC:9855 (HGNC)
5906 (Entrez Gene)
179520 (OMIM)
Chr1 p13.3 Chr1:111619783-111713479 (+)
GRCh38
P62834 (UniProt | EBI)
NM_001010935 (RefSeq)
mouse Rap1a MGI:97852 (MGI)
109905 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 46.45 cM Chr3:105727267-105801330 (-)
GRCm38
ENSMUSG00000068798 (Ensembl Gene Model)
ENSMUSP00000088174 (Ensembl)
ENSMUST00000090678 (Ensembl)
rat Rap1a 295347 (Entrez Gene)
Chr2 q34 P62836 (UniProt | EBI)
NM_001005765 (RefSeq)
chimpanzee RAP1A 469408 (Entrez Gene)
Chr1 XP_009427727 (RefSeq)
rhesus macaque RAP1A 704404 (Entrez Gene)
Chr1 NP_001248567 (RefSeq)
NM_001261638 (RefSeq)
cattle RAP1A 282031 (Entrez Gene)
Chr3 P62833 (UniProt | EBI)
NM_174448 (RefSeq)
dog RAP1A 483225 (Entrez Gene)
Chr17 XP_863066 (RefSeq)
chicken RAP1A 419867 (Entrez Gene)
Chr26 XP_003642773 (RefSeq)
western clawed frog rap1a 100124947 (Entrez Gene)
ChrUN NP_001096357 (RefSeq)
NM_001102887 (RefSeq)
zebrafish rap1aa 415242 (Entrez Gene)
Chr8 NP_001002152 (RefSeq)
NM_001002152 (RefSeq)
rap1ab 406714 (Entrez Gene)
Chr11 NP_001230108 (RefSeq)
NM_001243179 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory