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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2137

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PVALB HGNC:9704 (HGNC)
5816 (Entrez Gene)
168890 (OMIM)
HGNC homology
Chr22 q12.3 Chr22:36800701-36819473 (-)
GRCh38.p7
P20472 (UniProt | EBI)
NM_002854 (RefSeq)
mouse Pvalb MGI:97821 (MGI)
19293 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 36.93 cM Chr15:78191114-78206400 (-)
GRCm38
ENSMUSG00000005716 (Ensembl Gene Model)
ENSMUSP00000112598 (Ensembl)
ENSMUST00000120592 (Ensembl)
rat Pvalb 25269 (Entrez Gene)
Chr7 q34 P02625 (UniProt | EBI)
NM_022499 (RefSeq)
chimpanzee PVALB 470201 (Entrez Gene)
Chr22 XP_016794586 (RefSeq)
cattle PVALB 538603 (Entrez Gene)
Chr5 Q0VCG3 (UniProt | EBI)
NM_001076114 (RefSeq)
dog PVALB 481278 (Entrez Gene)
Chr10 XP_022280185 (RefSeq)
chicken PVALB 396459 (Entrez Gene)
Chr1 P80026 (UniProt | EBI)
NM_001159315 (RefSeq)
zebrafish pvalb6 402806 (Entrez Gene)
Chr3 NP_991136 (RefSeq)
NM_205573 (RefSeq)
frog, western clawed pvalb 100486372 (Entrez Gene)
Chr4 XP_002934266 (RefSeq)
macaque, rhesus PVALB 697272 (Entrez Gene)
Chr10 XP_028683580 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory