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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2136

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPRZ1 HGNC:9685 (HGNC)
5803 (Entrez Gene)
176891 (OMIM)
PTPRZ1 (MyGene.info)
HGNC homology
Chr7 q31.32 Chr7:121873105-122062036 (+)
GRCh38.p7
P23471 (UniProt | EBI)
NM_001369396 (RefSeq)
mouse Ptprz1 MGI:97816 (MGI)
19283 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 9.92 cM Chr6:22875502-23052916 (+)
GRCm38
ENSMUSG00000068748 (Ensembl Gene Model)
ENSMUSP00000088056 (Ensembl)
ENSMUST00000090568 (Ensembl)
rat Ptprz1 25613 (Entrez Gene)
Chr4 q22 Q62656 (UniProt | EBI)
NM_001170685 (RefSeq)
chimpanzee PTPRZ1 463681 (Entrez Gene)
Chr7 XP_003951165 (RefSeq)
cattle PTPRZ1 317725 (Entrez Gene)
Chr4 NP_001179201 (RefSeq)
NM_001192272 (RefSeq)
chicken PTPRZ1 396403 (Entrez Gene)
Chr1 NP_001186241 (RefSeq)
NM_001199312 (RefSeq)
zebrafish ptprz1a 497461 (Entrez Gene)
Chr25 XP_005163194 (RefSeq)
ptprz1b 553019 (Entrez Gene)
Chr4 XP_021331076 (RefSeq)
macaque, rhesus PTPRZ1 574174 (Entrez Gene)
Chr3 NP_001265330 (RefSeq)
NM_001278401 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory