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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21353

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB38 HGNC:9776 (HGNC)
23682 (Entrez Gene)
606281 (OMIM)
Chr11 q14 Chr11:88113247-88175467 (-)
GRCh38
P57729 (UniProt | EBI)
NM_022337 (RefSeq)
mouse Rab38 MGI:1919683 (MGI)
72433 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 49.19 cM Chr7:88430273-88491466 (+)
GRCm38
OTTMUSG00000025016 (VEGA)
OTTMUSP00000030222 (VEGA)
OTTMUST00000061576 (VEGA)
rat Rab38 252916 (Entrez Gene)
Chr1 q32 NP_665717 (RefSeq)
NM_145774 (RefSeq)
chimpanzee RAB38 451468 (Entrez Gene)
Chr11 XP_508683 (RefSeq)
rhesus macaque RAB38 705189 (Entrez Gene)
Chr14 XP_001104269 (RefSeq)
cattle RAB38 533332 (Entrez Gene)
Chr29 XP_001252195 (RefSeq)
dog RAB38 608181 (Entrez Gene)
Chr21 XP_850212 (RefSeq)
chicken RAB38 428095 (Entrez Gene)
Chr1 XP_425653 (RefSeq)
western clawed frog rab38 100497999 (Entrez Gene)
ChrUN XP_002936591 (RefSeq)
zebrafish LOC100007788 100007788 (Entrez Gene)
Chr10 XP_003199402 (RefSeq)
rab38a 100003274 (Entrez Gene)
Chr15 XP_001342875 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory