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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCN10A HGNC:10582 (HGNC)
6336 (Entrez Gene)
604427 (OMIM)
SCN10A (MyGene.info)
HGNC homology
Chr3 p22.2 Chr3:38697110-38794010 (-)
Q9Y5Y9 (UniProt | EBI)
NM_001293306 (RefSeq)
mouse Scn10a MGI:108029 (MGI)
20264 (Entrez Gene)
Gene Tree
HGNC homology
Chr9 71.33 cM Chr9:119608456-119719322 (-)
20264 (NCBI Gene Model)
Q6QIY3 (UniProt | EBI)
NM_001205321 (RefSeq)
rat Scn10a 29571 (Entrez Gene)
Chr8 q32 Q62968 (UniProt | EBI)
NM_017247 (RefSeq)
chimpanzee SCN10A 460274 (Entrez Gene)
Chr3 XP_009443466 (RefSeq)
cattle SCN10A 100299477 (Entrez Gene)
Chr22 XP_015314974 (RefSeq)
dog SCN10A 477026 (Entrez Gene)
Chr23 O46669 (UniProt | EBI)
NM_001003203 (RefSeq)
macaque, rhesus SCN10A 694962 (Entrez Gene)
Chr2 XP_014986800 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory