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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2126

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPRC HGNC:9666 (HGNC)
5788 (Entrez Gene)
151460 (OMIM)
Chr1 q31-q32 Chr1:198638968-198757476 (+)
GRCh38
Hepatitis C Virus, Susceptibility to
Severe Combined Immunodeficiency, Autosomal Recessive, T Cell-Negative, B Cell-Positive, Nk Cell-Positive
P08575 (UniProt | EBI)
NM_002838 (RefSeq)
mouse Ptprc MGI:97810 (MGI)
19264 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 60.73 cM Chr1:138063407-138175706 (-)
GRCm38
Systemic Lupus Erythematosus; SLE
OTTMUSG00000043098 (VEGA)
OTTMUSP00000063320 (VEGA)
OTTMUST00000113094 (VEGA)
rat Ptprc 24699 (Entrez Gene)
Chr13 q13 P04157 (UniProt | EBI)
NM_001109887 (RefSeq)
chimpanzee PTPRC 457607 (Entrez Gene)
Chr1 XP_001141441 (RefSeq)
cattle PTPRC 407152 (Entrez Gene)
Chr16 NP_001193452 (RefSeq)
NM_001206523 (RefSeq)
dog PTPRC 490255 (Entrez Gene)
Chr7 XP_005622335 (RefSeq)
chicken PTPRC 386580 (Entrez Gene)
Chr8 NP_989748 (RefSeq)
NM_204417 (RefSeq)
western clawed frog ptprc 100493434 (Entrez Gene)
ChrUN XP_002932222 (RefSeq)
zebrafish ptprc 559154 (Entrez Gene)
Chr22 XP_687562 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory